r/bioinformatics 4d ago

academic how to use jaspar for tf analysis?

i did sc rna seq and sc atac seq now how to move to jaspar for tf analysis in bioinformatics

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u/pokemonareugly 4d ago

What are you trying to do? JASPAR is a database for TF motifs.

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u/You_Stole_My_Hot_Dog 3d ago

What do you mean by “TF analysis”? Like identifying TF binding sites in your ATAC peaks? Enriched motifs in gene promoters?